Equally Directed Abnormalities

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Documentation for package ‘edira’ version 1.2.3

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AMLdata Acute Myeloid Leukemia Data
CN Acute Myeloid Leukemia Data
CN_ref Acute Myeloid Leukemia Data
CN_ref_segmented Acute Myeloid Leukemia Data
CN_segmented Acute Myeloid Leukemia Data
cytoband Cytoband Information
edira Externally Centered Correlation Coefficient and Wilcoxon Test for Equally Directed Abnormalities
EdiraCostMatrix Segmentation cost matrix
EdiraSegment Fit a piecewise constant curve: segmentation by dynamic programming
edira_ratios Externally Centered Correlation Coefficient and Wilcoxon Test for Equally Directed Abnormalities for ratios data
find_regions Detection of DNA Regions Displaying Equally Directed Abnormalities
GE Acute Myeloid Leukemia Data
GE_ref Acute Myeloid Leukemia Data
plot.edira Plotting Function for the Externally Centered Correlation Coefficient and the Wilcoxon Test for Equally Directed Abnormalities
segmentCN Segmentation of copy number data for joint analysis with other variable